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Question: After loading up RNAseq data, what to do next?
1
gravatar for shuo.li
2.3 years ago by
shuo.li • 10
Australia
shuo.li • 10 wrote:

Hi,

Could an expert please give me a lay instruction on below matters? --

Q1: I have uploaded my RNAseq data (gene expresssion) to galaxy, what is the next step? such as quality control??

Q2: I have used up 95% of my space, is there any possiblity to get more space, such as create a 2nd account and transfer some data to the new account?

Thanks a lot for your helpI

Lucy
rna-seq • 547 views
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modified 2.3 years ago by Jennifer Hillman Jackson ♦ 25k • written 2.3 years ago by shuo.li • 10
0
gravatar for Jennifer Hillman Jackson
2.3 years ago by
Jennifer Hillman Jackson ♦ 25k
United States
Jennifer Hillman Jackson ♦ 25k wrote:

Hi Lucy,

A tutorial for RNA-seq is here: https://github.com/nekrut/galaxy/wiki/Reference-based-RNA-seq

There is a one-account per user quota at Galaxy Main http://usegalaxy.org. Details: https://wiki.galaxyproject.org/Main

Using more than one account will trigger a duplicate detection and the risk of all data being deleted and the accounts removed is possible - so please avoid that. The disk quota is fixed at 250 GB.

To free up disk for analysis, permanently delete data. How to: https://wiki.galaxyproject.org/Learn/ManagingDatasets#Delete_vs_Delete_Permanently

If your work is large, moving to a local or cloud Galaxy where you can control the resources is the best alternative. More: https://wiki.galaxyproject.org/BigPicture/Choices

Thanks, Jen, Galaxy team
ADD COMMENT • link written 2.3 years ago by Jennifer Hillman Jackson ♦ 25k
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