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Question: Using Tool On Input Data Set
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gravatar for kauerbach@comcast.net
6.2 years ago by
kauerbach@comcast.net • 40
kauerbach@comcast.net • 40 wrote:
Hello, I'm new to Galaxy and have a very basic question.  If I upload a dataset, (say, a protein sequence file in fasta format), and I want to use one of the tools on this dataset, what do I have to do to make the tool aware of my dataset?  When I tried it the tools did not know that my uploaded data file existed. Thank you.
galaxy • 773 views
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modified 6.2 years ago by Peter Cock • 1.4k • written 6.2 years ago by kauerbach@comcast.net • 40
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gravatar for Peter Cock
6.2 years ago by
Peter Cock • 1.4k
European Union
Peter Cock • 1.4k wrote:
You need to make sure your dataset is recognised as 'fasta', which can be checked/edited via the 'pencil' icon. As long as the tool's XML file defines the input as type 'fasta', then it should offer any 'fasta' format files in the *current* history as inputs when used. Peter
ADD COMMENT • link written 6.2 years ago by Peter Cock • 1.4k
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