Question: NCBI SRA Tool Importer can't import a list
3
gravatar for ewilli28
8 weeks ago by
ewilli2850
ewilli2850 wrote:

I am having trouble importing lists of SRA accession numbers using the NCBI SRA Tools. I am using the same accession list text file that worked last month. Has anyone else recently noticed a similar issue?

fastq sra • 99 views
ADD COMMENTlink modified 14 days ago by Jennifer Hillman Jackson25k • written 8 weeks ago by ewilli2850

I am having the same issue, even when i try with a previous list that had worked about a month ago. Shows up on the history as failed but no error info or reporting options.

ADD REPLYlink written 7 weeks ago by tbg50230

Same bug appeared some time ago.

ADD REPLYlink written 7 weeks ago by agatyr20
0
gravatar for Jennifer Hillman Jackson
14 days ago by
United States
Jennifer Hillman Jackson25k wrote:

Hello,

There is a known bug when using a list with these tools. We are working to resolve it.

Issue ticket, to comment on and/or follow for resolution: https://github.com/galaxyproject/usegalaxy-playbook/issues/160

Thanks for reporting the problem! Jen, Galaxy team

ADD COMMENTlink written 14 days ago by Jennifer Hillman Jackson25k
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