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• job run error in cufflink
  Dear sir, i have run my job from last two weeks ... but my job does not execute ... plzzz help m...
• running error see below
  Dear Sir, The running error is that The following line didn't have 4 columns: #track name="tb_kn...
• Bowtie2 not working
  Dear sir, i have uploaded some RNA Seq data and done with FastQc. I wanted to map the reads to m...
• Tophat job not running
  Dear sir, my top hat job not running. My data were showing some exclamatory sign after running t...
• FastQC Fatal Error: Exit code 1 ()
  Hi, I'm new to Galaxy and have minimal experience with Linux. I have installed Galaxy on a local...
• Job delays at Galaxy Main http://usegalaxy.org
  Dear sir I have run my job from last 3 weeks ....but my job does not executed last three weeks pl...
• problems with SAM-to-BAM tool
  Dear sirs, I run the SAM-to-BAM tool during a ChIPseq mapping workflow and received this error: ...
• fastqc data Fatal error: Exit code 1 ()
  I have enquired with an error for just to simple run a FASTQC tool in galaxy following is the er...
• Fastqc In Main Galaxy Server?
  Hi, I've tried FastQC in the main galaxy server and it is throwing me an error: 0 bytes An erro...
• HELP with FastQC Webpage
  Hello, I have created a workflow for ChIP-Seq, yesterday everything worked fine and I was able t...
• unable to run tophat on trim galore processed reads
  dear sir i have run tophat on reads trimmed by trim galore with reference to hg19. i am getting r...
• TopHat error message
  Hi, I've been trying to run TopHat on my RNAseq data. I ran my data through FastQC and then Trim...
• cufflink trancript analysis
  Dear sir, i have run my cufflink analysis on friday but my job does not execute... please help me...
• Trimmomatic data on Fastqc
  Hell, i am unable to load "Trimmomatic on Fastq groomer on data file"on Fastqc. it show Fatal err...
• "Server Error"On Main When Viewing Or Downloading Fastqc Results
  I've run FastQC successfully on several different files, but I can not download them or view them...
• Job errors at https://usegalaxy.org Galaxy version 17.09 18.01
  Dear Sir, The bam file from tophat is not downloadable it is showing HTTP error repeatedly. Pls r...
• Tophat output Bam file
  Dear Sir, Tophat output bam file couldn't be downloadable there is an error showing this "usegal...
• FastQC IndexError: list index out of range
  Hi Yesterday the four runs that was doing failed at the FastQC stage - some were FastQC of fastq...
• FASTQC not entering the running phase
  Hello, can somebody help/explain something to me? I've been trying to get galaxy to preform a Fas...
• BAM upload and manipulations involving new datatype "bam_native" present with error - follow for corrections
  Dear Sir, File uploading after showing two files. Cufflink analysis showing paused for the analys...
• Tophat failed to run on RNAseq data?
  Tophat failed to run on my RNAseq data. Before running tophat, I groomed, trimmed, and filtered m...
• Query
  Respected sir I am using fastaq to convert fasta and quality file. But after sometime i am getti...
• Data Upload Problem
  Dear Sir/Madam, I downloaded Galaxy and installed it locally. In my test run, I tried to upload...
• Trinity Error, job did not complete
  Hello, I asked a question last week regarding my Trinity assembly. It would not start the run (a...