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Question: RNA-seq data analysis workflow!
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gravatar for karthickn1982
17 months ago by
karthickn1982 • 0
karthickn1982 • 0 wrote:

Hello,

I am a newcomer to galaxy based data analysis.I am looking for a workflow to analyse RNA-seq data obtained from illumina (Paired ends). can you please help?

Thanks for the help.

Best regards Karthick
rna-seq • 1.4k views
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modified 17 months ago • written 17 months ago by karthickn1982 • 0
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gravatar for Mo Heydarian
17 months ago by
Mo Heydarian ♦ 830
United States
Mo Heydarian ♦ 830 wrote:

Hello Karthick,

Please have a look at this tutorial for de novo transcriptome reconstruction of RNA-seq data: https://galaxyproject.github.io/training-material//topics/transcriptomics/tutorials/de-novo/tutorial.html

Please let us know if you have any questions.

Thanks for using Galaxy!

Cheers,

Mo Heydarian
ADD COMMENT • link written 17 months ago by Mo Heydarian ♦ 830
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gravatar for Mo Heydarian
17 months ago by
Mo Heydarian ♦ 830
United States
Mo Heydarian ♦ 830 wrote:

Hello Karthick,

Please have a look at this tutorial for de novo transcriptome reconstruction of RNA-seq data: https://galaxyproject.github.io/training-material//topics/transcriptomics/tutorials/de-novo/tutorial.html

Please let us know if you have any questions.

Thanks for using Galaxy!

Cheers,

Mo Heydarian
ADD COMMENT • link written 17 months ago by Mo Heydarian ♦ 830
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gravatar for karthickn1982
17 months ago by
karthickn1982 • 0
karthickn1982 • 0 wrote:

Dear Mo Heydarian,

Thank you very much for the tutorial.

I tried the tutorial and found it little advance. Since i am biologist with primitive bioinformatic skills, it will be helpful if you could point to some tutorials/videos for complete analysis of RNA-seq analyis.

Thanks for the help,

Best regards Karthick
ADD COMMENT • link written 17 months ago by karthickn1982 • 0
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