Question: FIle transfer from GEO to usegalaxy.org
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stuti.mehta • 0 wrote:
I'm trying to import some public GEO data into usegalaxy.org - specifically, the mouse RNA-seq data from GSE79552. When I go to 'get data', then EBI-SRA, input GSE79552, the search results for mouse RNA-seq do not have a download link (ftp, galaxy, nothing) - whereas I do see SRA files (and can download them) on the NCBI website.
1) So why are only some files from the same study available to be imported via EBI-SRA? Is there anything I can do to rectify this?
2) Is there another way to get the data to usegalaxy? Or must I download all these files individually, then upload them into usegalaxy?
Thanks for any pointers you can provide.
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modified 18 months ago
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Jennifer Hillman Jackson ♦ 25k
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18 months ago by
stuti.mehta • 0
