I have a production galaxy with the rsync data manager installed. When I attempt to fetch a genome I can search, however the tool shows in red no options available.
Heads up! This is a static archive of our support site. Please go to help.galaxyproject.org if you want to reach the Galaxy community. If you want to search this archive visit the Galaxy Hub search
Question: Rsync with G2 no options available
2
djevo1 • 60 wrote:
ADD COMMENT
• link
•
modified 13 months ago
by
Daniel Blankenberg ♦♦ 1.7k
•
written
2.1 years ago by
djevo1 • 60
1
0
Jennifer Hillman Jackson ♦ 25k wrote:
Hello,
The rsync Data Manager has been problematic. It will very likely be replaced near term (still in progress).
For now, I suggest fetching fasta datasets directly from the external source and creating your own indexes from there. Fetch the genome, index for Sam (allow to complete), then Picard (allow to complete), index for 2bit (can be run concurrent and no downstream indexes are dependent), and then continue with any other indexes associated with the tools that will be in use.
Thanks, Jen, Galaxy team
Please log in to add an answer.
Use of this site constitutes acceptance of our User
Agreement
and Privacy
Policy.
Powered by Biostar
version 16.09
Traffic: 168 users visited in the last hour