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• Interupted Running Jobs Restart
  We are running galaxy on pbs cluster. In out setting some jobs can take several weeks to finish a...
• integrate Galaxy with PBS Pro using DRMAA
  Dear all, We would like to setup the Galaxy that would integrate with our cluster using PBS Pro ...
• Galaxy PBS system
  I am currently setting up a PBS system to work with Galaxy. When submitting a job I see the foll...
• Number Of Concurrent Jobs/User
  Is it possible to limit number of concurrent jobs when job_runner is pbs? The setting in universe...
• Running Galaxy Jobs On Pbs Pro Cluster
  Hello, I'm having some troubles installing pbs_drmaa-1.0.2.tar.gz (http://sourceforge.net/projec...
• Galaxy not starting correctly - pbs_python error?
  Dear all, I'm trying to use pbs to queue jobs in our cluster. So I modified my job_conf.xml file...
• Repeated Error With Tophat
  Hello- I am trying to use Galaxy to investigate gene expression differences among datasets. The...
• Xgrid And Galaxy
  Hello, I'm trying to determine if Galaxy will work with Xgrid to set up a small cluster of Mac's...
• Galaxy And Xgrid
  Hello, I'm trying to determine if Galaxy will work with Xgrid to set up a small cluster of Mac's...
• Clustal Error During Bowtie Run (Public Server)
  Dear all, I was trying to use Bowtie on the public server to align my groomed paired reads to a ...
• Tophat Mapping Error
  Hi all, I got the following error infomation during Tophat mapping An error occurred running this...
• Possible To Browse Local Filesystem
  Dear all, We are setting up a galaxy istance on our server (HPC Cluster with torque and PBS) for...
• (No Subject)
  Hello, I am fairly new to galaxy and I am trying to use bowtie2 to map my reads against a custom...
• (Closed) Galaxy PBS Error
  Hi all! I trying run Galaxy with PBS. My server have debian installed. I enable job_conf.xml wit...
• switching between local node and cluster nodes
  Hello, I have setup a workflow in galaxy and I have modified my job_conf.xml file to queue these...
• Custom toolshed tool: job memory requirements
  Is it possible to add job requirements to (toolshed) tools? For example, if a tool minimally req...
• tools, uploading, clusters and destinations
  Hi, we have a local Galaxy 17.05 linked up to a SLURM cluster. Since upload and some downloads (...
• sge drmaa cluster galaxy configuration
  I recently installed a local galaxy. I want to distribute jobs to local (as default and run in h...
• Fail to reproduce galaxy job environment
  Hi, I have a Galaxy 16.10 instance submitting onto a PBS controlled cluster using the module sys...