Question: galaxy setting problem on network
0
gravatar for mauro
2.9 years ago by
mauro0
Italy
mauro0 wrote:

I have problem on the connection from another computer on my galaxy server

 

alaxy.sample_tracking.external_service_types DEBUG 2016-01-08 18:11:25,784 Loaded external_service_type: Simple unknown sequencer 1.0.0
galaxy.sample_tracking.external_service_types DEBUG 2016-01-08 18:11:25,785 Loaded external_service_type: Applied Biosystems SOLiD 1.0.0
galaxy.workflow.scheduling_manager DEBUG 2016-01-08 18:11:25,786 Starting workflow schedulers
galaxy.web.framework.base DEBUG 2016-01-08 18:11:25,804 Enabling 'admin' controller, class: AdminGalaxy
galaxy.web.framework.base DEBUG 2016-01-08 18:11:25,811 Enabling 'library_common' controller, class: LibraryCommon
galaxy.web.framework.base DEBUG 2016-01-08 18:11:25,815 Enabling 'userskeys' controller, class: User
galaxy.web.framework.base DEBUG 2016-01-08 18:11:25,816 Enabling 'page' controller, class: PageController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:25,824 Enabling 'requests_admin' controller, class: RequestsAdmin
galaxy.web.framework.base DEBUG 2016-01-08 18:11:25,827 Enabling 'library_admin' controller, class: LibraryAdmin
galaxy.web.framework.base DEBUG 2016-01-08 18:11:25,830 Enabling 'external_service' controller, class: ExternalService
galaxy.web.framework.base DEBUG 2016-01-08 18:11:25,831 Enabling 'async' controller, class: ASync
galaxy.web.framework.base DEBUG 2016-01-08 18:11:25,831 Enabling 'requests_common' controller, class: RequestsCommon
galaxy.web.framework.base DEBUG 2016-01-08 18:11:25,831 Enabling 'search' controller, class: SearchController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:25,950 Enabling 'visualization' controller, class: VisualizationController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:25,955 Enabling 'history' controller, class: HistoryController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:25,957 Enabling 'forms' controller, class: Forms
galaxy.web.framework.base DEBUG 2016-01-08 18:11:25,979 Enabling 'workflow' controller, class: WorkflowController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:25,980 Enabling 'mobile' controller, class: Mobile
galaxy.web.framework.base DEBUG 2016-01-08 18:11:25,980 Enabling 'tag' controller, class: TagsController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:25,980 Enabling 'root' controller, class: RootController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:25,983 Enabling 'tool_runner' controller, class: ToolRunner
galaxy.web.framework.base DEBUG 2016-01-08 18:11:25,983 Enabling 'library' controller, class: Library
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,085 Enabling 'admin_toolshed' controller, class: AdminGalaxy
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,086 Enabling 'admin_toolshed' controller, class: AdminToolshed
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,090 Enabling 'user' controller, class: User
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,097 Enabling 'dataset' controller, class: DatasetInterface
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,101 Enabling 'data_manager' controller, class: DataManager
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,105 Enabling 'request_type' controller, class: RequestType
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,107 Enabling 'requests' controller, class: Requests
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,107 Enabling 'error' controller, class: Error
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,107 Enabling 'external_services' controller, class: ExternalServiceController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,108 Enabling 'biostar' controller, class: BiostarController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,109 Enabling 'dataset_collections' API controller, class: DatasetCollectionsController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,110 Enabling 'groups' API controller, class: GroupAPIController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,112 Enabling 'roles' API controller, class: RoleAPIController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,113 Enabling 'history_contents' API controller, class: HistoryContentsController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,113 Enabling 'datasets' API controller, class: DatasetsController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,113 Enabling 'history_dataset_extended_metadata' API controller, class: HistoryDatasetExtendMetadataController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,113 Enabling 'library_dataset_extended_metadata' API controller, class: LibraryDatasetExtendMetadataController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,114 Enabling 'job_files' API controller, class: JobFilesAPIController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,114 Enabling 'metrics' API controller, class: MetricsController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,122 Enabling 'search' API controller, class: SearchController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,122 Enabling 'group_roles' API controller, class: GroupRolesAPIController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,122 Enabling 'tools' API controller, class: ToolsController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,123 Enabling 'workflows' API controller, class: WorkflowsAPIController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,123 Enabling 'history_content_tags' API controller, class: HistoryContentTagsController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,123 Enabling 'history_tags' API controller, class: HistoryTagsController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,123 Enabling 'workflow_tags' API controller, class: WorkflowTagsController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,123 Enabling 'forms' API controller, class: FormDefinitionAPIController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,124 Enabling 'history_annotations' API controller, class: HistoryAnnotationsController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,124 Enabling 'history_content_annotations' API controller, class: HistoryContentAnnotationsController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,124 Enabling 'workflow_annotations' API controller, class: WorkflowAnnotationsController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,124 Enabling 'pages' API controller, class: PagesController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,125 Enabling 'remote_files' API controller, class: RemoteFilesAPIController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,129 Enabling 'libraries' API controller, class: LibrariesController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,129 Enabling 'library_contents' API controller, class: LibraryContentsController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,130 Enabling 'tool_data' API controller, class: ToolData
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,130 Enabling 'folder_contents' API controller, class: FolderContentsController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,130 Enabling 'datatypes' API controller, class: DatatypesController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,131 Enabling 'genomes' API controller, class: GenomesController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,131 Enabling 'authenticate' API controller, class: AuthenticationController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,134 Enabling 'jobs' API controller, class: JobController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,134 Enabling 'page_revisions' API controller, class: PageRevisionsController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,135 Enabling 'lda_datasets' API controller, class: LibraryDatasetsController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,136 Enabling 'history_content_provenance' API controller, class: HDAProvenanceController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,136 Enabling 'ldda_provenance' API controller, class: LDDAProvenanceController
beaker.container DEBUG 2016-01-08 18:11:26,140 data file ./database/citations/data/container_file/4/48/48e563f148dc04d8b31c94878c138019862e580d.cache
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,140 Enabling 'histories' API controller, class: HistoriesController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,140 Enabling 'group_users' API controller, class: GroupUsersAPIController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,142 Enabling 'users' API controller, class: UserAPIController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,143 Enabling 'configuration' API controller, class: ConfigurationController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,143 Enabling 'folders' API controller, class: FoldersController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,144 Enabling 'visualizations' API controller, class: VisualizationsController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,146 Enabling 'requests' API controller, class: RequestsAPIController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,148 Enabling 'quotas' API controller, class: QuotaAPIController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,148 Enabling 'samples' API controller, class: SamplesAPIController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,149 Enabling 'tool_shed_repositories' API controller, class: ToolShedRepositoriesController
galaxy.web.framework.base DEBUG 2016-01-08 18:11:26,149 Enabling 'request_types' API controller, class: RequestTypeAPIController
galaxy.webapps.galaxy.buildapp DEBUG 2016-01-08 18:11:26,360 Enabling 'httpexceptions' middleware
galaxy.webapps.galaxy.buildapp DEBUG 2016-01-08 18:11:26,361 Enabling 'recursive' middleware
galaxy.webapps.galaxy.buildapp DEBUG 2016-01-08 18:11:26,363 Enabling 'error' middleware
galaxy.webapps.galaxy.buildapp DEBUG 2016-01-08 18:11:26,363 Enabling 'trans logger' middleware
galaxy.webapps.galaxy.buildapp DEBUG 2016-01-08 18:11:26,363 Enabling 'x-forwarded-host' middleware
galaxy.webapps.galaxy.buildapp DEBUG 2016-01-08 18:11:26,363 Enabling 'Request ID' middleware
galaxy.webapps.galaxy.buildapp DEBUG 2016-01-08 18:11:26,365 added url, path to static middleware: /plugins/visualizations/charts/static, ./config/plugins/visualizations/charts/static
galaxy.webapps.galaxy.buildapp DEBUG 2016-01-08 18:11:26,365 added url, path to static middleware: /plugins/visualizations/graphview/static, ./config/plugins/visualizations/graphview/static
galaxy.webapps.galaxy.buildapp DEBUG 2016-01-08 18:11:26,365 added url, path to static middleware: /plugins/visualizations/scatterplot/static, ./config/plugins/visualizations/scatterplot/static
galaxy.queue_worker INFO 2016-01-08 18:11:26,366 Binding and starting galaxy control worker for main
Starting server in PID 7349.
serving on 0.0.0.0:8080 view at http://127.0.0.1:8080

If I use from another pc the ip of the machine where I have installed galaxy I'm not able to connect.

I use centos 6.7

Could you please help me?

 

 

posgress network galaxy • 910 views
ADD COMMENTlink modified 2.9 years ago • written 2.9 years ago by mauro0
2
gravatar for jmchilton
2.9 years ago by
jmchilton1.1k
United States
jmchilton1.1k wrote:

You have configured Galaxy correctly it appears. Neither 0.0.0.0 or 127.0.0.1 are what you would use. You'll have to find the IP address of the machine (e.g. using the ifconfig command-line tool, your administration panel for your OS, or a service like http://whatismyipaddress.com/). If your IP address is something like 100.200.30.40 then Galaxy should be accessible from other machines on your network at http://100.200.30.40:8080. If it is not, the most likely problem is that you have a firewall blocking access - either on your machine or at the router level. Debugging these problems can be tough unless you are responsible for maintaining the network infrastructure you are using. I would seek advice or look for a more general source of information and talk to your networking people - if your institution has people responsible for this. 

 

ADD COMMENTlink written 2.9 years ago by jmchilton1.1k
0
gravatar for mauro
2.9 years ago by
mauro0
Italy
mauro0 wrote:

I have resolved only change the ip 0.0.0.0 with my ip of the machine!!

thanks so much

 

ADD COMMENTlink written 2.9 years ago by mauro0
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