Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Forum
Planet
All »
Home
Log In
Question: miSEQ data analysis
0
gravatar for reach2anamika
4.4 years ago by
reach2anamika • 10
United States
reach2anamika • 10 wrote:

I have the miSeq paired end reads as two different fastaq files. How can I assemble/merge them through galaxy?
galaxy • 2.3k views
ADD COMMENT • link •
modified 4.4 years ago by Bjoern Gruening ♦ 5.1k • written 4.4 years ago by reach2anamika • 10
1
gravatar for Bjoern Gruening
4.4 years ago by
Bjoern Gruening ♦ 5.1k
Germany
Bjoern Gruening ♦ 5.1k wrote:

Sure, you can process it with Galaxy standard tools! Start with the mapping of your reads with bowtie2 and depending on your experiment (RNA-seq? ChIP-seq?) start your downstream analysis. To get started it's always good to have a look at the Galaxy Videos and Tutorials at http://vimeo.com/galaxyproject.

Happy research!

Bjoern
ADD COMMENT • link written 4.4 years ago by Bjoern Gruening ♦ 5.1k
Please log in to add an answer.

Similar posts • Search »

Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 181 users visited in the last hour