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Question: Hg19 With Rcrs
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gravatar for rabab khairat
5.4 years ago by
rabab khairat • 10
rabab khairat • 10 wrote:
Dear Galaxy,Before the new modifications, i was using hg19 human genome with the rCRS mitochondrial genome for mapping. but now i can't recognize it from the hg19 genomes in the genomes drop-down list.could you please help me, which one is with rCRS.my kind regards Rabab Khairat
galaxy • 1.3k views
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modified 5.4 years ago by Jennifer Hillman Jackson ♦ 25k • written 5.4 years ago by rabab khairat • 10
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gravatar for Jennifer Hillman Jackson
5.4 years ago by
Jennifer Hillman Jackson ♦ 25k
United States
Jennifer Hillman Jackson ♦ 25k wrote:
Hello Rabab, If you click on the pencil icon for a dataset, on the first tab's form "Attributes", the Database/Build pull-down menu has a genome listed named: Homo sapiens (hg19 with mtDNA replaced with rCRS) (Homo_sapiens_nuHg19_mtrCRS) This is also available as a built-in reference genome for most, if not all, tools on the public Main instance and can also be obtained through the rsync server for local instance use. http://wiki.galaxyproject.org/Admin/Data%20Integration#Get_the_data Hopefully this helps, Jen Galaxy team -- Jennifer Hillman-Jackson Galaxy Support and Training http://galaxyproject.org
ADD COMMENT • link written 5.4 years ago by Jennifer Hillman Jackson ♦ 25k
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