Question: Galaxy October 5, 2012 Distribution & News Brief
0
Jennifer Hillman Jackson ♦ 25k wrote:
*Galaxy October 5, 2012 Distribution & News Brief*
/http://wiki.g2.bx.psu.edu/DevNewsBriefs/2012_10_05/
/*
Highlights:*
http://wiki.g2.bx.psu.edu/News
/
**
*
*BWA <http: bio-bwa.sourceforge.net=""/>* tool wrappers /migrated
<http: wiki.g2.bx.psu.edu="" devnewsbriefs="" 2012_10_05#bwa_migration_="" to_tool_shed="">/
to the *Galaxy Main Tool Shed <http: toolshed.g2.bx.psu.edu=""/>*.
*
*Tool Factory* paper has been /E Published
<http: wiki.g2.bx.psu.edu="" devnewsbriefs="" 2012_10_05#galaxy_tool_fa="" ctory_paper_e_published="">/
in PubMed <http: www.ncbi.nlm.nih.gov="" pubmed=""> at *PMID: 23024011
<http: www.ncbi.nlm.nih.gov="" pubmed="" 23024011="">*.
*
The *Tool Shed Wiki <http: wiki.g2.bx.psu.edu="" tool%20shed="">* wiki
has been re-written with a new, cleaner presentation. And check
out
all the /new features
<http: wiki.g2.bx.psu.edu="" devnewsbriefs="" 2012_10_05#tool_shed="">/!
*
Accessible *tool versions* in the UI and *new exit code features*
enable /clearer experimental tracking and ease reproducibility
<http: wiki.g2.bx.psu.edu="" devnewsbriefs="" 2012_10_05#tools="">/.
*
Release also includes *Visualization
<http: wiki.g2.bx.psu.edu="" devnewsbriefs="" 2012_10_05#visualization_="" framework="">*
updates, a new admin tool for /PostgreSQL
<http: www.postgresql.org="">/ *Dataset cleanup
<http: wiki.g2.bx.psu.edu="" devnewsbriefs="" 2012_10_05#dataset_cleanup="">*,
and improvements in *API
<http: wiki.g2.bx.psu.edu="" devnewsbriefs="" 2012_10_05#ap="">* ,
*Workflow
<http: wiki.g2.bx.psu.edu="" devnewsbriefs="" 2012_10_05#workflows="">*,
and
*Security
<http: wiki.g2.bx.psu.edu="" devnewsbriefs="" 2012_10_05#security_fixes="">*
components.
http://getgalaxy.org
http://bitbucket.org/galaxy/galaxy-dist
*
new: * $ hg clone http://www.bx.psu.edu/hg/galaxy galaxy-dist
*
upgrade:* $ hg pull -u -r b5bda7a5c345
**
*
Thanks for using Galaxy!*
Jennifer Jackson & Galaxy Team
http://galaxyproject.org