Question: How To Replace Ensembl Gene Id With Gene Names In Cuffdiff Output?
0
ericliaowei@gmail.com • 70 wrote:
Hi all,
I had the following Cuffdiff output from genes defferetial expression
testing:
test_id gene_id gene locus sample_1 sample_2 status value_1 value_2
log2(fold_change) test_stat p_value q_value XLOC_000001 XLOC_000001
ENST00000450305,ENST00000456328,ENST00000515242,ENST00000518655
chr1:11868-31109 NORMAL 1 OK 0.558797 0.84004 0.588134 -0.44598
0.655611
0.767628
There are four transcript IDs belong to gene DDXL11L1, my question is
how
to replace these ID with official gene names?
Thanks,
--
Wei Liao
Research Scientist,
Brentwood Biomedical Research Institute
16111 Plummer St.
Bldg 7, Rm D-122
North Hills, CA 91343
818-891-7711 ext 7645
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modified 6.6 years ago
by
Jennifer Hillman Jackson ♦ 25k
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written
6.6 years ago by
ericliaowei@gmail.com • 70