Question: Problem in genrating Correlation Plot
1
gravatar for pallumeghawat25
19 months ago by
pallumeghawat25 • 10 wrote:

I'm work on differential gene expression. I do have Tophat and cuff link files. I'm not able to generate plot correlation. It needs Heatmap file, how to generate Heatmap file via tophat or cufflinks,

heatmap • 541 views
ADD COMMENT • link • modified 19 months ago by subhosaha001 • 0 • written 19 months ago by pallumeghawat25 • 10

When I am directly loading a paired end sequencing sra file in Galaxy with its SRA acession , its not generating two bam files by deafult! Please help.

ADD REPLY • link written 19 months ago by subhosaha001 • 0

Please post your question as brand new question, instead of a reply/comment added to another distinct question. If you ever want to reference another post to add context, the link to it can be included.

Thanks, Jen, Galaxy team

ADD REPLY • link modified 19 months ago • written 19 months ago by Jennifer Hillman Jackson ♦ 25k

FYI for others: This sub-issue was resolved through email using by explaining the appropriate NCBI SRA retrieval tool (and explaining usage, also available on those tool forms). -Jen

ADD REPLY • link written 19 months ago by Jennifer Hillman Jackson ♦ 25k
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