Question: VariantsToTable? Extract AF from INFO column of VCF
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rich_jp • 0 wrote:
Hi all, I would like to extract the AF from the INFO column of GATK Unified Genotyper VCF files (e.g. in tabular format) for downstream analysis. This can be done with GATK VariantsToTable for example but how can this be done inside Galaxy (not finding a good tool wrapper for this)?
Cheers, Richard
Both work great - thanks Björn :)
Richard
You can accept the answer as correct. This will enable other to find it easier. Thanks!