Question: Downloading tools from toolshed
0
gravatar for cdean11
2.7 years ago by
cdean1120
cdean1120 wrote:

I want to download a bam to fastq converter from Galaxy's tool shed, but don't want to have to download 20 other tools to do so. For example, I know Picard and Bedtools comes with a bam2fastq, but I don't want the whole package installed. There is one bam_to_fastq converter in the toolshed, but it hasn't been updated since 2011. Is there any way to download an individual tool from a package of tools like Picard or Bedtools?

galaxy • 757 views
ADD COMMENTlink modified 2.7 years ago by Bjoern Gruening5.1k • written 2.7 years ago by cdean1120
3
gravatar for Bjoern Gruening
2.7 years ago by
Bjoern Gruening5.1k
Germany
Bjoern Gruening5.1k wrote:

Unfortunately not for these both packages. This has historical reasons because these packages are one of the first we created. Today we have established a best practice guide that states that only one tools should be in one repository.

Sorry,

Bjoern

ADD COMMENTlink modified 2.7 years ago • written 2.7 years ago by Bjoern Gruening5.1k
Please log in to add an answer.

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 175 users visited in the last hour