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• ChIP-seq sequence data sources
  hi I predict nucleosome using the chip-seq. i need to chip-seq data (bovine) . please tell me ho...
• RNA-seq data extract
  Galaxy upload RNA-seq data（.gz） need to extract it？ How to extract RNA-seq data（.gz）？ Thanks!
• Analysis workflow of miRNA-seq data
  I'm looking to analyse RNA-Seq data from miRNA. How similar is the workflow to RNA-seq analysis?
• Creating Heatmap from RNA-seq
  How to create a heatmap using RNA-Seq data? We analyze the RNA-seq using Tophat-Cufflink-Cuffdiff...
• rna seq read cleaning
  Please suggest me a tool for removing bacterial contamination from RNA seq reads before assembly.
• ChIP-seq paired-end analysis
  Could you help me to understand how to analyze the data CHIP- seq paired-end on galaxy ? Thank y...
• CuffDiff is no more in the list of NGS:RNA-seq
  I cannot see anymore CuffDiff in the list opening NGS:RNA-seq. I need to use it. Help
• ATAC-seq analysis using Galaxy
  Hi, Is there a Galaxy pipeline to analyze ATAC-seq results? Any help in this regard is appreciat...
• SnpEff variant analysis problem with reference annotation input (refseq)
  I have been using snpff variant effect and annotation without any problems for weeks. Today I tri...
• Sorting ChIP-Seq peaks
  Once I have ChIP-Seq peaks from MACS, I am wondering if there is an easy to sort the peaks accord...
• RNA-seq raw data of zebrafish
  Hello! I need RNA-seq raw data of tumors in zebrafish for a PhD job, does anyone knows an useful...
• RNA-SEQ analysis tutorial
  Hi, i am a new user to Galaxy and interested to start RNA-SEQ analysis. for this purpose, i need ...
• Exome Seq Work Flow
  I was wondering if Galaxy has any work flow for calling mutations in Exome seq and then annotatin...