hi
i did my DeSeq2 from the results from htseq-count
my input was 3 control and 6 test
htseq-count result uc001aak.4 0 uc001aak.4 0 uc001aak.4 0 uc001aak.4 0 uc001aak.4 0 uc001aak.4 0 uc001aak.4 0 uc001aak.4 0 uc001aak.4 0 uc001aak.4 2 uc001aak.4 0
the result from deseq2 is like this
uc060kef.1 180.5926675 -1.306161383 0.152473325 -8.566491098 1.07E-17 1.38E-13 uc060tgd.1 992.195252 -1.447544241 0.178611927 -8.10440974 5.30E-16 3.44E-12 uc058mvb.1 478.1811761 1.025237773 0.173633756 5.904599395 3.54E-09 1.53E-05 uc003pil.2 427.5855981 0.770298658 0.140736599 5.473335739 4.42E-08 0.000114544 uc061zxt.1 82.21639908 -0.986557914 0.179465594 -5.49719807 3.86E-08 0.000114544 uc062zbc.1 47.11435901 -0.8895186 0.178256468 -4.990105618 6.03E-07 0.001304284 uc001ogf.4 141.6566029 -0.834506687 0.170421261 -4.896728753 9.74E-07 0.001598306 uc061qlz.1 183.5004481 -0.821882633 0.167922646 -4.894412118 9.86E-07 0.001598306 uc061zcf.1 62.93212095 -0.808181912 0.183024186 -4.415711005 1.01E-05 0.014506656
how do i interpret...i am not really clear with it ....
how do i find the downregulated and upregulated genes from this result
plz help..
shafna